Hi all, Does the compatibility take in account for the case that we choose?

I know that the compatibility takes in account for all the computer guts, but I just want to make sure that my smaller case will fit everything else.

I know that my mobo is a mini-ATX which will fit my mini tower case (http://pcpartpicker.com/part/thermaltake-case-vf6000bws)

And here's the final product that I'm thinking (http://pcpartpicker.com/p/KxpC)

I would love any and all feedback and most importantly, if the case will fit everything that I want.v